CDS: F53G12.7
F53G12.7 | SMap | S_parent | Sequence | F53G12 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 177 | ||
694 | 928 | ||||
981 | 1236 | ||||
1348 | 1663 | ||||
DB_info | Database | TREMBL | O01799_CAEEL | ||
TrEMBL_AC | O01799 | ||||
NDB | GI_number | 2088713 | |||
NCBI | RefSeq | NM_058278 | |||
Protein_id | F53G12 | AAB54156 | 1 | ||
DB_remark | C. elegans COL-45 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | F53G12.7 | |||
Corresponding_transcript | F53G12.7 | ||||
Corresponding_protein | WP:CE11018 | ||||
Corresponding_PCR_product | cenix:75-f4 | ||||
mv_F53G12.7 | |||||
sjj_F53G12.7 | |||||
Corresponding_RNAi_reagent | Cenix:75-f4 | ||||
sjj_F53G12.7 | |||||
Matching_cDNA (7) | |||||
RNAi_result | Cenix:75-f4 | ||||
JA:F53G12.7 | |||||
WB_RNAi_result | JA:F53G12.7 | ||||
MV_SV:mv_F53G12.7 | |||||
Cenix:75-f4 | |||||
GO_term | GO:0042302 | IEA | Inferred_automatically | ||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Variation (5) | |||||
Microarray_results | SMD_F53G12.7 | ||||
Brief_identification | cuticular collagen | ||||
Method | curated |