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CDS: F54D1.3
| F54D1.3 | SMap | S_parent | Sequence | F54D1 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 159 | ||
| 206 | 979 | ||||
| DB_info | Database | TREMBL | Q20764_CAEEL | ||
| TrEMBL_AC | Q20764 | ||||
| NDB | GI_number | 3877521 | |||
| NCBI | RefSeq | NM_069715 | |||
| Protein_id | F54D1 | CAB00860 | 1 | ||
| DB_remark | C. elegans COL-127 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Predicted | ||||
| Visible | Gene | F54D1.3 | |||
| Corresponding_transcript | F54D1.3 | ||||
| Corresponding_protein | WP:CE05938 | ||||
| Corresponding_PCR_product | cenix:242-c4 | ||||
| mv_F54D1.2 | |||||
| sjj_F54D1.3 | |||||
| mv_F54D1.3 | |||||
| Corresponding_RNAi_reagent | Cenix:242-c4 | ||||
| sjj_F54D1.3 | |||||
| RNAi_result | Cenix:242-c4 | ||||
| JA:F54D1.3 | |||||
| WB_RNAi_result (8) | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_F54D1.3 | ||||
| 188366_s_at | |||||
| Aff_F54D1.2 | |||||
| Brief_identification | collagen | ||||
| Method | curated |
