CDS: F54D8.3a
F54D8.3a | SMap | S_parent | Sequence | F54D8 | |
---|---|---|---|---|---|
Structure | Source_exons (6) | ||||
DB_info | Database | TREMBL | Q20780_CAEEL | ||
TrEMBL_AC | Q20780 | ||||
NDB | GI_number | 16950426 | |||
NCBI | RefSeq | NM_065680 | |||
Protein_id | F54D8 | AAA20615 | 3 | ||
DB_remark | C. elegans ALH-1 protein; contains similarity to Pfam domain PF00171 (Aldehyde dehydrogenase family)contains similarity to Interpro domains IPR012303 (NAD-dependent aldehyde dehydrogenase), IPR002086 (Aldehyde dehydrogenase) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | EMBL | AU199846 | ||
Inferred_automatically | transcript_builder | ||||
Visible | Gene | F54D8.3 | |||
Corresponding_transcript | F54D8.3a.1 | ||||
F54D8.3a.2 | |||||
Corresponding_protein | WP:CE29809 | ||||
Corresponding_PCR_product | cenix:301-g5 | ||||
mv_G_YK53 | |||||
sjj_F54D8.3 | |||||
TH:301G5 | |||||
Matching_cDNA (353) | |||||
WB_RNAi_result | TH:301G5 | ||||
JA:F54D8.3 | |||||
MV_SV:mv_G_YK53 | |||||
Cenix:301-g5 | |||||
GO_term | GO:0016491 | IEA | Inferred_automatically | ||
GO:0008152 | IEA | Inferred_automatically | |||
Microarray_results | SMD_F54D8.3 | ||||
190851_at | |||||
Aff_F54D8.3 | |||||
Brief_identification | Aldehyde dehydrogenase 2 | ||||
Y2H_target | Y2H010839 | ||||
Remark | removed exons 1 and 5 based on EST data - 01-09-12 js | ||||
SL1 trans-spliced; see yk732b6.5 | |||||
modified 3' splice site of 3rd intron when sequence was modified by 1 bp 011107 db | |||||
Associated_feature | WBsf000390 | ||||
WBsf007270 | |||||
WBsf013772 | |||||
WBsf015797 | |||||
Method | curated |