RNAiDB Tree View

Gene: F55H2.4

F55H2.4	SMap	S_parent	Sequence	F55H2
	Chromosome	III
	Identity (5)
	Gene_info	Gene_class	lrg
		Allele	ok684	Inferred_automatically	From strain object: RB854
		Strain	RB854
		Structured_description	Provisional_description	lrg-1 encodes a truncated paralog of let-99, a protein with a DEP domain (Domain found in Dishevelled, Egl-10, and Pleckstrin); lrg-1(RNAi) animals have no obvious phenotype; since the nucleotide similarity of lrg-1 to let-99 extends beyond the lrg-1 CDS, and since lrg-1 has no obvious function in RNAi assays, this gene may be decaying towards pseudogene status.	Paper_evidence	WBPaper00005515
					Person_evidence	WBPerson567
					Curator_confirmed	WBPerson567
					Date_last_updated	17 Jun 2004 00:00:00
			Concise_description	lrg-1 encodes a truncated paralog of let-99, a protein with a DEP domain (Domain found in Dishevelled, Egl-10, and Pleckstrin); lrg-1(RNAi) animals have no obvious phenotype; since the nucleotide similarity of lrg-1 to let-99 extends beyond the lrg-1 CDS, and since lrg-1 has no obvious function in RNAi assays, this gene may be decaying towards pseudogene status.
	Molecular_info	Corresponding_CDS_history	F55H2.4:wp108
		Corresponding_pseudogene	F55H2.4
		Corresponding_PCR_product (7)
		Corresponding_RNAi_reagent (10)
	Experimental_info	WB_RNAi_result	TH:320a9
			TH:320b9
			JA:F55H2.3
			JA:F55H2.4
			Simmer:F55H2.4
			MV_SV:mv_K08E7.3
			Cenix:320-a9
			Cenix:320-b9
			PF:GL1_4D12
			PF:GL1_6E4
	Reference	WBPaper00005515
	Remark	Previously connected to .3 and .4 which have been merged to make a pseudogene [030814 krb]
		Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.	CGC_data_submission
	Method	Gene