CDS: F56F11.4a
F56F11.4a | SMap | S_parent | Sequence | F56F11 | |
---|---|---|---|---|---|
Structure | Source_exons (5) | ||||
DB_info | Database | TREMBL | Q9TZ65_CAEEL | ||
TrEMBL_AC | Q9TZ65 | ||||
NDB | GI_number | 14916328 | |||
Protein_id | F56F11 | AAK21407 | 2 | ||
DB_remark | contains similarity to Pfam domain PF00004 (ATPase family associated with various cellular activities (AAA))contains similarity to Interpro domains IPR003959 (AAA ATPase, central region), IPR003960 (AAA-protein subdomain), IPR005937 (26S proteasome subunit P45), IPR003593 (AAA ATPase) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Accession_evidence | EMBL | AU111452 | ||
Visible | Gene | F56F11.4 | |||
Corresponding_transcript | F56F11.4a | ||||
Corresponding_protein | WP:CE28467 | ||||
Corresponding_PCR_product (4) | |||||
Corresponding_RNAi_reagent | Cenix:329-d3 | ||||
TH:329D3 | |||||
Matching_cDNA | yk718b6.5 | Inferred_automatically | transcript_builder.pl | ||
yk730a4.5 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:329-d3 | ||||
TH:329D3 | |||||
WB_RNAi_result (6) | |||||
GO_term (11) | |||||
Microarray_results | SMD_F56F11.4 | ||||
192330_at | |||||
Aff_F56F11.4 | |||||
Brief_identification | 26S protease regulatory subunit | ||||
Remark | changed the %' splice site in the first intron based on EST data - 01-07-11 js | ||||
SL1 trans-spliced; see yk718b6.5 | |||||
this isoform is based on EMBL accession AU111452 | |||||
Associated_feature | WBsf015980 | ||||
Method | curated |