CDS: F57B1.3
F57B1.3 | SMap | S_parent | Sequence | F57B1 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 216 | ||
265 | 990 | ||||
DB_info | Database | TREMBL | Q20922_CAEEL | ||
TrEMBL_AC | Q20922 | ||||
NDB | GI_number | 3877751 | |||
NCBI | RefSeq | NM_073882 | |||
Protein_id | F57B1 | CAB01509 | 1 | ||
DB_remark | C. elegans COL-159 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | F57B1.3 | |||
Corresponding_transcript | F57B1.3 | ||||
Corresponding_protein | WP:CE11290 | ||||
Corresponding_PCR_product | cenix:241-d5 | ||||
sjj_F57B1.3 | |||||
Corresponding_RNAi_reagent | Cenix:241-d5 | ||||
sjj_F57B1.3 | |||||
Matching_cDNA | CK575149 | Inferred_automatically | transcript_builder.pl | ||
yk73c7.5 | Inferred_automatically | transcript_builder.pl | |||
yk1684a02.3 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:241-d5 | ||||
JA:F57B1.3 | |||||
WB_RNAi_result | JA:F57B1.3 | ||||
JA:F57B1.4 | |||||
GO_term | GO:0042302 | IEA | Inferred_automatically | ||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Microarray_results | SMD_F57B1.3 | ||||
172705_x_at | |||||
Aff_F57B1.3 | |||||
Brief_identification | collagen | ||||
Y2H_target | Y2H005846 | ||||
Method | curated |