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CDS: F58A3.1b
| F58A3.1b | SMap | S_parent | Sequence | F58A3 | |
|---|---|---|---|---|---|
| Structure | Source_exons (8) | ||||
| DB_info | Database | TREMBL | Q8I4H8_CAEEL | ||
| TrEMBL_AC | Q8I4H8 | ||||
| NDB | GI_number | 3877837 | |||
| NCBI | RefSeq | NM_077444 | |||
| Protein_id | F58A3 | CAB02672 | 1 | ||
| DB_remark | C. elegans LDB-1 protein; contains similarity to Pfam domain PF01803 (LIM-domain binding protein)contains similarity to Interpro domain IPR002691 (LIM binding protein) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | NDB | AV195605 | ||
| Inferred_automatically | transcript_builder | ||||
| Visible | Gene | F58A3.1 | |||
| Corresponding_transcript | F58A3.1b | ||||
| Corresponding_protein | WP:CE11352 | ||||
| Corresponding_PCR_product | cenix:72-e2 | ||||
| mv_F58A3.1a | |||||
| sjj_F58A3.1 | |||||
| mv_AAB38367 | |||||
| Corresponding_RNAi_reagent | Cenix:72-e2 | ||||
| sjj_F58A3.1 | |||||
| Matching_cDNA | yk643g6.5 | Inferred_automatically | transcript_builder.pl | ||
| yk89b5.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:72-e2 | ||||
| JA:F58A3.1 | |||||
| Simmer:F58A3.1 | |||||
| WB_RNAi_result | JA:F58A3.1 | ||||
| Simmer:F58A3.1 | |||||
| MV_SV:mv_F58A3.1a | |||||
| Cenix:72-e2 | |||||
| GO_term (6) | |||||
| Variation | ok896 | ||||
| Microarray_results | SMD_F58A3.1 | ||||
| 180490_s_at | |||||
| Aff_F58A3.1A | |||||
| Remark | 961001: Spliced 5'-UTR, attempts to incorporate EST data over this splice produce a stop codon, (TG/A). | ||||
| Method | curated |
