![Adult](JavaScript:void
window.open("/cgi-bin/rnaidb/popUpImage.cgi?imgName=N2wormfinal.png",
"RNAiDB Help","toolbar=no, location=no, directories=no,
status=no, menubar=no, scrollbars=yes, resizable=no,
copyhistory=no, width=1000, height=550"))
CDS: F58A3.2b
| F58A3.2b | SMap | S_parent | Sequence | F58A3 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (18) | |||||
| DB_info | Database | SwissProt | SwissProt_ID | EGL15_CAEEL | ||
| SwissProt_AC | Q10656 | |||||
| NDB | GI_number | 35210142 | ||||
| Protein_id | F58A3 | CAC70094 | 2 | |||
| DB_remark | C. elegans EGL-15 protein; contains similarity to Pfam domains PF07686 (Immunoglobulin V-set domain)(2), PF00047 (Immunoglobulin domain)(3), PF07714 (Protein tyrosine kinase), PF07679 (Immunoglobulin I-set domain)(3), PF00069 (Protein kinase domain)contains similarity to Interpro domains IPR003598 (Immunoglobulin C2 type), IPR000719 (Protein kinase), IPR007110 (Immunoglobulin-like), IPR001245 (Tyrosine protein kinase), IPR008266 (Tyrosine protein kinase, active site) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Isoform | Accession_evidence | NDB | AY288941 | |||
| Visible | Gene | F58A3.2 | ||||
| Corresponding_transcript | F58A3.2b.1 | |||||
| F58A3.2b.2 | ||||||
| F58A3.2b.3 | ||||||
| Corresponding_protein | WP:CE35726 | |||||
| Corresponding_PCR_product | cenix:53-b12 | |||||
| sjj_F58A3.2 | ||||||
| mv_AAC46934 | ||||||
| Matching_cDNA | yk1611e05.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1551b12.3 | Inferred_automatically | transcript_builder.pl | ||||
| AY292532 | Inferred_automatically | transcript_builder.pl | ||||
| yk1336e05.3 | Inferred_automatically | transcript_builder.pl | ||||
| Expr_pattern | Expr2119 | |||||
| WB_RNAi_result (8) | ||||||
| GO_term (7) | ||||||
| Variation (22) | ||||||
| Microarray_results | SMD_F58A3.2 | |||||
| 171996_x_at | ||||||
| 194138_s_at | ||||||
| Aff_F58A3.2 | ||||||
| Remark | [010829 kj] Isoform added based on gaze prediction and ESTs | |||||
| [030915 pad] The previous F58A3.2b prediction now F58A3.2b:wp110 did not have any supporting evidence for the truncation of the final exon so was altered to reflect the egl-15 isoform defined by AY288941. alternative 5a - 5b exon can be selected. | Paper_evidence | WBPaper00006107 | ||||
| Accession_evidence | NDB | AY288941 | ||||
| Method | curated |
