CDS: F59A2.1a
F59A2.1a | SMap | S_parent | Sequence | F59A2 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 18 | ||
68 | 160 | ||||
206 | 631 | ||||
685 | 1110 | ||||
1287 | 1747 | ||||
1797 | 2694 | ||||
2955 | 3098 | ||||
3157 | 3273 | ||||
DB_info | Database | TREMBL | Q21021_CAEEL | ||
TrEMBL_AC | Q21021 | ||||
NDB | GI_number | 3877856 | |||
NCBI | RefSeq | NM_065302 | |||
Protein_id | F59A2 | CAA84330 | 1 | ||
DB_remark | C. elegans NPP-9 protein; contains similarity to Pfam domain PF00638 (RanBP1 domain)contains similarity to Interpro domains IPR000156 (RanBP1), IPR011993 (Pleckstrin homology-type), IPR001876 (Zinc finger, RanBP2-type) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | CEK015F8F | ||
Inferred_automatically | transcript_builder | ||||
Visible | Gene | F59A2.1 | |||
Corresponding_transcript | F59A2.1a | ||||
Corresponding_protein | WP:CE17939 | ||||
Corresponding_PCR_product | cenix:320-c10 | ||||
mv_F59A2.1 | |||||
sjj_F59A2.1 | |||||
TH:320c10 | |||||
Corresponding_RNAi_reagent | Cenix:320-c10 | ||||
sjj_F59A2.1 | |||||
TH:320c10 | |||||
Matching_cDNA (9) | |||||
RNAi_result (5) | |||||
WB_RNAi_result (6) | |||||
GO_term | GO:0040004 | IMP | Inferred_automatically | ||
GO:0009792 | IMP | Inferred_automatically | |||
GO:0040035 | IMP | Inferred_automatically | |||
GO:0000003 | IMP | Inferred_automatically | |||
Microarray_results | SMD_F59A2.1 | ||||
Brief_identification | Nucleoporin | ||||
Y2H_target | Y2H011464 | ||||
Remark | Similarity with the mouse HTF9-A protein | ||||
[980309 dl] : Modified prediction based on EST data | |||||
Associated_feature | WBsf013535 | ||||
Method | curated |