CDS: H06I04.3b
H06I04.3b | SMap | S_parent | Sequence | H06I04 | |
---|---|---|---|---|---|
Structure | Source_exons (8) | ||||
DB_info | Database | TREMBL (2) | |||
NDB | GI_number | 60543537 | |||
Protein_id | H06I04 | AAX22286 | 1 | ||
DB_remark | contains similarity to Pfam domains PF07780 (Spb1 C-terminal domain), PF01728 (FtsJ-like methyltransferase)contains similarity to Interpro domains IPR012920 (Spb1, C-terminal), IPR002877 (Ribosomal RNA methyltransferase RrmJ/FtsJ) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding (2) | ||||
Isoform | Accession_evidence | EMBL | CEK054FXR | ||
Visible | Gene | H06I04.3 | |||
Corresponding_transcript | H06I04.3b | ||||
Corresponding_protein | WP:CE38200 | ||||
Corresponding_PCR_product | cenix:333-a5 | ||||
cenix:333-h6 | |||||
cenix:338-d5 | |||||
mv_H06I04.3a | |||||
sjj_H06I04.h | |||||
sjj_H06I04.i | |||||
sjj_Y53G8B_93.d | |||||
TH:333a5 | |||||
TH:333H6 | |||||
TH:338D5 | |||||
TH:339-a3 | |||||
mv_H06I04.3b | |||||
mv_H06I04.g | |||||
sjj_H06I04.g | |||||
sjj_Y53G8B_93.c | |||||
sjj_Y53G8B_1025.c | |||||
smd_Y53G8B_93.d | |||||
smd_Y53G8B_1025.c | |||||
Corresponding_RNAi_reagent (10) | |||||
Matching_cDNA | yk268b10.3 | Inferred_automatically | transcript_builder.pl | ||
yk1748b11.5 | Inferred_automatically | transcript_builder.pl | |||
yk1697g03.5 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result (11) | |||||
WB_RNAi_result (14) | |||||
GO_term (6) | |||||
Microarray_results (11) | |||||
Remark | removed the 3' exon based on EST data(yk1697g03.3)[20050228 po] | ||||
this isoform is based on EMBL accession CEK054FXR | |||||
Associated_feature | WBsf017086 | ||||
Method | curated |