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CDS: K01B6.1   

K01B6.1SMapS_parentSequenceK01B6
Structure Source_exons (7)
DB_info Database SwissProt SwissProt_ID YMM1_CAEEL
SwissProt_AC P34489
NDB GI_number 3878079
NCBI RefSeq NM_066646
Protein_idK01B6 CAA801281
DB_remarkC. elegans FOZI-1 protein; contains similarity to Pfam domain PF02181 (Formin Homology 2 Domain)contains similarity to Interpro domains IPR003104 (Actin-binding FH2), IPR007087 (Zinc finger, C2H2-type)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Visible GeneK01B6.1
Corresponding_transcriptK01B6.1
Corresponding_proteinWP:CE00238
Corresponding_PCR_product cenix:320-h10
mv_K01B6.1
sjj_K01B6.1
TH:320H10
Corresponding_RNAi_reagent Cenix:320-h10
sjj_K01B6.1
TH:320H10
Matching_cDNA (6)
Expr_patternExpr64
RNAi_result Cenix:320-h10
JA:K01B6.1
TH:320H10
WB_RNAi_result TH:320H10
JA:K01B6.1
MV_SV:mv_K01B6.1
Cenix:320-h10
GO_term (5)
Variationtm563
Microarray_results SMD_K01B6.1
191980_at
Aff_K01B6.1
Brief_identificationZinc-finger motif C2H2 type
Y2H_targetY2H002983
Remark contains poly-Glutamine stretch
Matches C2H2 Zn fingers with blastp. Has C-x2-C-x11-H-x4-H motif; PS00028 requires 12x in the middle.
Although it's one base off the Prosite motif, many Zn-finger proteins have this motif, e.g. SDC1_CAEEL P24349.
Methodcurated