CDS: K01G5.2b
K01G5.2b | SMap | S_parent | Sequence | K01G5 | |
---|---|---|---|---|---|
Structure | Source_exons (6) | ||||
DB_info | Database | TREMBL | O17918_CAEEL | ||
TrEMBL_AC | O17918 | ||||
NDB | GI_number | 6434312 | |||
Protein_id | K01G5 | CAB07243 | 2 | ||
DB_remark | C. elegans HPL-2 protein; contains similarity to Pfam domains PF01393 (Chromo shadow domain), PF00385 ('chromo' (CHRromatin Organisation MOdifier) domain)contains similarity to Interpro domains IPR000953 (Chromo), IPR008251 (Chromo shadow) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | C36928 | ||
Inferred_automatically | transcript_builder | ||||
Visible | Gene | K01G5.2 | |||
Corresponding_transcript | K01G5.2b | ||||
Corresponding_protein | WP:CE25037 | ||||
Corresponding_PCR_product (6) | |||||
Corresponding_RNAi_reagent | Cenix:326-d9 | ||||
sjj_K01G5.2 | |||||
TH:326D9 | |||||
Matching_cDNA | yk470a11.3 | Inferred_automatically | transcript_builder.pl | ||
AF123573 | Inferred_automatically | transcript_builder.pl | |||
yk625a6.3 | Inferred_automatically | transcript_builder.pl | |||
OSTF052A7_1 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:326-d9 | ||||
JA:K01G5.2 | |||||
TH:326D9 | |||||
WB_RNAi_result | TH:326D9 | ||||
JA:K01G5.2 | |||||
MV_SV:mv_K01G5.2c | |||||
Cenix:326-d9 | |||||
GO_term | GO:0003682 | IEA | Inferred_automatically | ||
GO:0006333 | IEA | Inferred_automatically | |||
GO:0000785 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
Variation | ok916 | ||||
ok917 | |||||
tm1489 | |||||
Microarray_results (6) | |||||
Brief_identification | 'chromo' (CHRromatin Organization MOdifier) domain | ||||
Y2H_bait (10) | |||||
Remark | Annotated using Pfam | ||||
[alt] Alternate isoform defined by AF123573 | |||||
Method | curated |