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CDS: K03H1.2
| K03H1.2 | SMap | S_parent | Sequence | K03H1 | |
|---|---|---|---|---|---|
| Structure | Source_exons (7) | ||||
| DB_info | Database | SwissProt | SwissProt_ID | MOG1_CAEEL | |
| SwissProt_AC | P34498 | ||||
| NDB | GI_number | 3878176 | |||
| Protein_id | K03H1 | CAA82662 | 1 | ||
| DB_remark | C. elegans MOG-1 protein; contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain), PF04408 (Helicase associated domain (HA2)), PF07717 (Domain of unknown function (DUF1605))contains similarity to Interpro domains IPR011545 (DEAD/DEAH box helicase, N-terminal), IPR002464 (ATP-dependent helicase, DEAH-box), IPR007502 (Helicase-associated region), IPR011709 (Protein of unknown function DUF1605), IPR001410 (DEAD/DEAH box helicase), IPR001650 (Helicase, C-terminal) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | K03H1.2 | |||
| Corresponding_transcript | K03H1.2 | ||||
| Corresponding_protein | WP:CE01027 | ||||
| Corresponding_PCR_product (6) | |||||
| Corresponding_RNAi_reagent (5) | |||||
| Matching_cDNA | yk530f4.3 | Inferred_automatically | transcript_builder.pl | ||
| yk74g10.3 | Inferred_automatically | transcript_builder.pl | |||
| yk30e7.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1475f07.3 | Inferred_automatically | transcript_builder.pl | |||
| yk130e7.5 | Inferred_automatically | transcript_builder.pl | |||
| yk113e12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk142c4.5 | Inferred_automatically | transcript_builder.pl | |||
| yk530f4.5 | Inferred_automatically | transcript_builder.pl | |||
| yk421g7.5 | Inferred_automatically | transcript_builder.pl | |||
| yk113e12.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1475f07.5 | Inferred_automatically | transcript_builder.pl | |||
| yk421g7.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1068c04.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1085f06.3 | Inferred_automatically | transcript_builder.pl | |||
| yk282b2.3 | Inferred_automatically | transcript_builder.pl | |||
| yk76e2.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1085f06.5 | Inferred_automatically | transcript_builder.pl | |||
| yk160d5.5 | Inferred_automatically | transcript_builder.pl | |||
| yk565a6.5 | Inferred_automatically | transcript_builder.pl | |||
| yk3e6.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1073e02.5 | Inferred_automatically | transcript_builder.pl | |||
| yk282b2.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1073e02.3 | Inferred_automatically | transcript_builder.pl | |||
| yk76e2.3 | Inferred_automatically | transcript_builder.pl | |||
| yk3e6.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1068c04.3 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result (6) | |||||
| WB_RNAi_result (6) | |||||
| GO_term (9) | |||||
| Microarray_results | SMD_K03H1.2 | ||||
| 193315_s_at | |||||
| Aff_K03H1.2 | |||||
| Brief_identification | RNA helicase (DEAH subfamily) | ||||
| Remark | very strong similarity to yeast pre-mRNA splicing factors 22 and 16 over about 500 residues in central region | ||||
| charged N-terminus | |||||
| Method | curated |
