CDS: K06B4.2
K06B4.2 | SMap | S_parent | Sequence | K06B4 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 48 | ||
95 | 442 | ||||
1273 | 1636 | ||||
2210 | 2466 | ||||
DB_info | Database | SwissProt | SwissProt_ID | NHR52_CAEEL | |
SwissProt_AC | O17928 | ||||
NDB | GI_number | 3878284 | |||
NCBI | RefSeq | NM_074498 | |||
Protein_id | K06B4 | CAB05761 | 1 | ||
DB_remark | C. elegans NHR-52 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | K06B4.2 | |||
Corresponding_transcript | K06B4.2 | ||||
Corresponding_protein | WP:CE11784 | ||||
Corresponding_PCR_product | cenix:46-g2 | ||||
mv_K06B4.2 | |||||
sjj_K06B4.2 | |||||
Corresponding_RNAi_reagent | Cenix:46-g2 | ||||
Matching_cDNA | OSTF194G5_1 | Inferred_automatically | transcript_builder.pl | ||
yk271b11.3 | Inferred_automatically | transcript_builder.pl | |||
OSTR194G5_1 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:46-g2 | ||||
WB_RNAi_result | SA:yk271b11 | ||||
Cenix:46-g2 | |||||
GO_term (7) | |||||
Variation | CE5-26 | ||||
tm1057 | |||||
Microarray_results | SMD_K06B4.2 | ||||
193670_at | |||||
Aff_K06B4.2 | |||||
Brief_identification | Zinc finger, C4 type (two domains) | ||||
Remark | Annotated using Pfam | ||||
[020619 kj] K06B4.1 and .2 are co-transcribed (see mRNA AF273797 and ESTs yk271b11) | |||||
Method | curated |