CDS: K06B4.7
K06B4.7 | SMap | S_parent | Sequence | K06B4 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 48 | ||
133 | 480 | ||||
992 | 1355 | ||||
1443 | 1705 | ||||
DB_info | Database | TREMBL | O17931_CAEEL | ||
TrEMBL_AC | O17931 | ||||
NDB | GI_number | 9367138 | |||
Protein_id | K06B4 | CAB05764 | 2 | ||
DB_remark | C. elegans NHR-197 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | K06B4.7 | |||
Corresponding_transcript | K06B4.7 | ||||
Corresponding_protein | WP:CE25931 | ||||
Corresponding_PCR_product | cenix:198-c7 | ||||
mv_K06B4.7 | |||||
sjj_K06B4.7 | |||||
Corresponding_RNAi_reagent | Cenix:198-c7 | ||||
sjj_K06B4.7 | |||||
Matching_cDNA | OSTF171B8_1 | Inferred_automatically | transcript_builder.pl | ||
RNAi_result | Cenix:198-c7 | ||||
JA:K06B4.7 | |||||
WB_RNAi_result (5) | |||||
GO_term (6) | |||||
Variation | tm1271 | ||||
Microarray_results | SMD_K06B4.7 | ||||
194099_at | |||||
Aff_K06B4.7 | |||||
Brief_identification | Ligand-binding domain of nuclear hormone receptors, Zinc finger, C4 type (two domains) | ||||
Remark | [970723 dl] Pfam model for C4-type zinc finger (PF00105) | ||||
Annotated using Pfam | |||||
[000609 dl] Prediction modified based on peptide similarity data; added N-terminal exon | |||||
Method | curated |