CDS: K08A8.3
K08A8.3 | SMap | S_parent | Sequence | K08A8 | |
---|---|---|---|---|---|
Structure | Source_exons (10) | ||||
DB_info | Database | TREMBL | Q21306_CAEEL | ||
TrEMBL_AC | Q21306 | ||||
NDB | GI_number | 1022971 | |||
NCBI | RefSeq | NM_076861 | |||
Protein_id | K08A8 | AAA79748 | 1 | ||
DB_remark | C. elegans COH-1 protein; contains similarity to Pfam domains PF04824 (Conserved region of Rad21 / Rec8 like protein), PF04825 (N terminus of Rad21 / Rec8 like protein)contains similarity to Interpro domains IPR006909 (Rad21/Rec8 like protein, C-terminal), IPR006910 (Rad21/Rec8 like protein, N-terminal) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | K08A8.3 | |||
Corresponding_transcript | K08A8.3 | ||||
Corresponding_protein | WP:CE04726 | ||||
Corresponding_PCR_product | cenix:66-f7 | ||||
sjj_K08A8.3 | |||||
mv_K08A8.3 | |||||
Corresponding_RNAi_reagent (2) | |||||
Matching_cDNA (9) | |||||
RNAi_result (5) | |||||
WB_RNAi_result (6) | |||||
GO_term (5) | |||||
Variation | snp_K08A8[1] | ||||
tm580 | |||||
tm582 | |||||
Microarray_results | SMD_K08A8.3 | ||||
174272_at | |||||
193972_at | |||||
Aff_K08A8.3 | |||||
Brief_identification | S. pombe double-strand-break repair protein, RAD21 | ||||
Remark | small region of similarity to ubiquitin carboxyl-terminal hydrolase was not included in predicted gene since it overlapped a C. elegans repeat family region | ||||
could be 2 separate genes broken between exons 4 and 5 | |||||
Method | curated |