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CDS: R02D1.1
| R02D1.1 | SMap | S_parent | Sequence | R02D1 | |
|---|---|---|---|---|---|
| Structure | Source_exons (8) | ||||
| DB_info | Database | TREMBL | O17082_CAEEL | ||
| TrEMBL_AC | O17082 | ||||
| NDB | GI_number | 21281579 | |||
| NCBI | RefSeq | NM_071793 | |||
| Protein_id | R02D1 | AAB70338 | 3 | ||
| DB_remark | C. elegans NHR-125 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | R02D1.1 | |||
| Corresponding_transcript | R02D1.1 | ||||
| Corresponding_protein | WP:CE30823 | ||||
| Corresponding_PCR_product | cenix:88-c11 | ||||
| mv_R02D1.1 | |||||
| sjj_R02D1.1 | |||||
| Corresponding_RNAi_reagent | Cenix:88-c11 | ||||
| sjj_R02D1.1 | |||||
| Matching_cDNA (5) | |||||
| RNAi_result | Cenix:88-c11 | ||||
| WB_RNAi_result | JA:R02D1.1 | ||||
| MV_SV:mv_R02D1.1 | |||||
| Cenix:88-c11 | |||||
| GO_term | GO:0003700 | IEA | Inferred_automatically | ||
| GO:0006355 | IEA | Inferred_automatically | |||
| GO:0005634 | IEA | Inferred_automatically | |||
| GO:0003707 | IEA | Inferred_automatically | |||
| Variation | uCE5-1205 | ||||
| uCE5-1206 | |||||
| uCE5-1207 | |||||
| Microarray_results (5) | |||||
| Remark | the 5' end was extended when the neighboring clone was finished and two small internal exons were removed because they fell over an inverted repeat-981217-js | ||||
| [20020529 db] modified C-terminus based on EST data | |||||
| [20020529 db] EST data indidcates two confirmed introns in the 3' UTR | |||||
| Method | curated |
