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CDS: R06C1.2
| R06C1.2 | SMap | S_parent | Sequence | R06C1 | |
|---|---|---|---|---|---|
| Structure | Source_exons (5) | ||||
| DB_info | Database | TREMBL | O62336_CAEEL | ||
| TrEMBL_AC | O62336 | ||||
| NDB | GI_number | 5824560 | |||
| Protein_id | R06C1 | CAB03221 | 2 | ||
| DB_remark | contains similarity to Pfam domain PF00348 (Polyprenyl synthetase)contains similarity to Interpro domain IPR000092 (Polyprenyl synthetase) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | R06C1.2 | |||
| Corresponding_transcript | R06C1.2 | ||||
| Corresponding_protein | WP:CE23901 | ||||
| Corresponding_PCR_product | cenix:133-h2 | ||||
| mv_R06C1.2 | |||||
| sjj_R06C1.2 | |||||
| Corresponding_RNAi_reagent | Cenix:133-h2 | ||||
| Matching_cDNA | OSTR080G6_1 | Inferred_automatically | transcript_builder.pl | ||
| OSTF080G6_1 | Inferred_automatically | transcript_builder.pl | |||
| yk573d7.5 | Inferred_automatically | transcript_builder.pl | |||
| yk573d7.3 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:133-h2 | ||||
| WB_RNAi_result | MV_SV:mv_R06C1.2 | ||||
| Cenix:133-h2 | |||||
| GO_term | GO:0009792 | IMP | Inferred_automatically | ||
| GO:0002119 | IMP | Inferred_automatically | |||
| GO:0040007 | IMP | Inferred_automatically | |||
| GO:0008299 | IEA | Inferred_automatically | |||
| Variation | snp_R06C1[1] | ||||
| snp_R06C1[2] | |||||
| snp_R06C1[3] | |||||
| snp_R06C1[4] | |||||
| Microarray_results | SMD_R06C1.2 | ||||
| 173889_s_at | |||||
| Aff_R06C1.2 | |||||
| Brief_identification | Polyprenyl synthetases | ||||
| Remark | Annotated using Pfam | ||||
| Gene should extend 5', but no good site to splice into | |||||
| [ms2 990820] extended the sequence 5', and modified the sequence 3', based on EST data | |||||
| Method | curated |
