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CDS: R07B1.1
| R07B1.1 | SMap | S_parent | Sequence | R07B1 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 209 | ||
| 258 | 370 | ||||
| 422 | 633 | ||||
| 1680 | 1823 | ||||
| DB_info | Database | SwissProt | SwissProt_ID | VAB15_CAEEL | |
| SwissProt_AC | Q09604 | ||||
| NDB | GI_number | 3878913 | |||
| Protein_id | R07B1 | CAA88539 | 1 | ||
| DB_remark | C. elegans VAB-15 protein; contains similarity to Pfam domain PF00046 (Homeobox domain)contains similarity to Interpro domains IPR012287 (Homeodomain-related), IPR000047 (Helix-turn-helix motif, lambda-like repressor), IPR001356 (Homeobox) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | R07B1.1 | |||
| Corresponding_transcript | R07B1.1 | ||||
| Corresponding_protein | WP:CE01626 | ||||
| Corresponding_PCR_product | cenix:58-f2 | ||||
| mv_R07B1.1 | |||||
| sjj_R07B1.1 | |||||
| Corresponding_RNAi_reagent | Cenix:58-f2 | ||||
| sjj_R07B1.1 | |||||
| Matching_cDNA | OSTR001E11_1 | Inferred_automatically | transcript_builder.pl | ||
| yk258d5.5 | Inferred_automatically | transcript_builder.pl | |||
| AF286218 | Inferred_automatically | transcript_builder.pl | |||
| OSTF001E11_1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result (5) | |||||
| WB_RNAi_result (7) | |||||
| GO_term (7) | |||||
| Variation | tm260 | ||||
| u781 | |||||
| Microarray_results | SMD_R07B1.1 | ||||
| 192609_at | |||||
| Aff_R07B1.1 | |||||
| Brief_identification | homeobox protein (msh subfamily) | ||||
| Remark | msh class homeobox protein | ||||
| Annotated using Pfam | |||||
| Method | curated |
