CDS: R09G11.2c
R09G11.2c | SMap | S_parent | Sequence | R09G11 | |
---|---|---|---|---|---|
Structure | Source_exons (11) | ||||
DB_info | Database | SwissProt | SwissProt_ID | NHR1_CAEEL | |
SwissProt_AC | Q21878 | ||||
NDB | GI_number | 30025121 | |||
Protein_id | R09G11 | AAC48174 | 4 | ||
DB_remark | C. elegans NHR-1 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | EMBL | AY204163 | ||
Visible | Gene | R09G11.2 | |||
Corresponding_transcript | R09G11.2c.1 | ||||
R09G11.2c.2 | |||||
Corresponding_protein | WP:CE33812 | ||||
Corresponding_PCR_product | cenix:88-f9 | ||||
cenix:222-g5 | |||||
mv_R09G11.2 | |||||
sjj_R09G11.2 | |||||
Matching_cDNA | AY204164 | Inferred_automatically | transcript_builder.pl | ||
AY204163 | Inferred_automatically | transcript_builder.pl | |||
yk65f10.3 | Inferred_automatically | transcript_builder.pl | |||
yk1566g11.5 | Inferred_automatically | transcript_builder.pl | |||
WB_RNAi_result | JA:R09G11.2 | ||||
MV_SV:mv_R09G11.2 | |||||
Cenix:88-f9 | |||||
Cenix:222-g5 | |||||
GO_term (6) | |||||
Variation | tm1032 | ||||
tm1187 | |||||
uCE6-1653 | |||||
uCE6-1654 | |||||
Microarray_results | SMD_R09G11.2 | ||||
192168_at | |||||
Aff_R09G11.2 | |||||
Remark | this isoform is based on EMBL accession AY204163 | ||||
Associated_feature | WBsf014905 | ||||
Method | curated |