![Adult](JavaScript:void
window.open("/cgi-bin/rnaidb/popUpImage.cgi?imgName=N2wormfinal.png",
"RNAiDB Help","toolbar=no, location=no, directories=no,
status=no, menubar=no, scrollbars=yes, resizable=no,
copyhistory=no, width=1000, height=550"))
CDS: T02G5.9b
| T02G5.9b | SMap | S_parent | Sequence | T02G5 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 104 | ||
| 169 | 750 | ||||
| 799 | 1376 | ||||
| 1425 | 1951 | ||||
| DB_info | Database | TREMBL | Q95ZQ3_CAEEL | ||
| TrEMBL_AC | Q95ZQ3 | ||||
| NDB | GI_number | 14574222 | |||
| NCBI | RefSeq | NM_063053 | |||
| Protein_id | T02G5 | AAK68395 | 1 | ||
| DB_remark | C. elegans KRS-1 protein; contains similarity to Pfam domains PF01336 (OB-fold nucleic acid binding domain), PF00152 (tRNA synthetases class II (D, K and N))contains similarity to Interpro domains IPR006195 (Aminoacyl-transfer RNA synthetase, class II), IPR004364 (tRNA synthetase, class II (D, K and N)), IPR002313 (Lysyl-tRNA synthetase, class-2), IPR012340 (Nucleic acid-binding, OB-fold, subgroup), IPR004365 (nucleic acid binding, OB-fold, tRNA/helicase-type) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | CEC1361 | ||
| Visible | Gene | T02G5.9 | |||
| Corresponding_transcript | T02G5.9b | ||||
| Corresponding_protein | WP:CE28247 | ||||
| Corresponding_PCR_product | cenix:149-d6 | ||||
| mv_T02G5.9 | |||||
| sjj_T02G5.9 | |||||
| smd_T02G5.9 | |||||
| Corresponding_RNAi_reagent | Cenix:149-d6 | ||||
| sjj_T02G5.9 | |||||
| Matching_cDNA | yk1565a12.5 | Inferred_automatically | transcript_builder.pl | ||
| RNAi_result | Cenix:149-d6 | ||||
| JA:T02G5.9 | |||||
| Simmer:T02G5.9 | |||||
| WB_RNAi_result | JA:T02G5.9 | ||||
| Simmer:T02G5.9 | |||||
| MV_SV:mv_T02G5.9 | |||||
| Cenix:149-d6 | |||||
| GO_term (15) | |||||
| Microarray_results | SMD_T02G5.9:2 | ||||
| SMD_T02G5.9 | |||||
| Brief_identification | lysyl-tRNA synthetase | ||||
| Remark | split into 2 genes on 2001-05-29 | ||||
| alternate first exon by yk156h11.5 | |||||
| this isoform is based on EMBL accession CEC1361 | |||||
| Associated_feature | WBsf015966 | ||||
| Method | curated |
