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CDS: T04C9.4b
| T04C9.4b | SMap | S_parent | Sequence | T04C9 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 115 | ||
| 933 | 1101 | ||||
| 1883 | 1940 | ||||
| DB_info | Database | TREMBL | Q9GP95_CAEEL | ||
| TrEMBL_AC | Q9GP95 | ||||
| NDB | GI_number | 22532782 | |||
| NCBI | RefSeq | NM_065899 | |||
| Protein_id | T04C9 | AAM97945 | 1 | ||
| DB_remark | C. elegans MLP-1 protein; contains similarity to Pfam domain PF00412 (LIM domain)contains similarity to Interpro domain IPR001781 (LIM, zinc-binding) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | AV187046 | ||
| Visible | Gene | T04C9.4 | |||
| Corresponding_transcript | T04C9.4b | ||||
| Corresponding_protein | WP:CE31590 | ||||
| Corresponding_PCR_product (9) | |||||
| Corresponding_RNAi_reagent (7) | |||||
| Matching_cDNA (6) | |||||
| RNAi_result (5) | |||||
| WB_RNAi_result (8) | |||||
| GO_term | GO:0008270 | IEA | Inferred_automatically | ||
| Variation | ok832 | ||||
| tm1080 | |||||
| Microarray_results (5) | |||||
| Remark | removed the first exon (2257-2184) based on EST data indicating trans-splicing (yk507b10.5) - 02-07-26 js | ||||
| SL1 trans-spliced; see yk507b10.5 | |||||
| this isoform is based on EMBL accession AV187046 | |||||
| Associated_feature | WBsf008339 | ||||
| Method | curated |
