CDS: T05A10.1c
T05A10.1c | SMap | S_parent | Sequence | T05A10 | |
---|---|---|---|---|---|
Structure | Source_exons (22) | ||||
DB_info | Database | TREMBL | Q7JM48_CAEEL | ||
TrEMBL_AC | Q7JM48 | ||||
NDB | GI_number | 42734250 | |||
Protein_id | T05A10 | CAF31487 | 1 | ||
DB_remark | C. elegans SMA-9 protein; contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type)contains similarity to Interpro domains IPR003604 (Zinc finger, U1-type), IPR007087 (Zinc finger, C2H2-type) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Paper_evidence | WBPaper00013343 | |||
Visible | Gene | T05A10.1 | |||
Corresponding_transcript | T05A10.1c | ||||
Corresponding_protein | WP:CE36397 | ||||
Corresponding_PCR_product | cenix:141-d2 | ||||
sjj_T05A10.1 | |||||
mv_T05A10.1 | |||||
Corresponding_RNAi_reagent | Cenix:141-d2 | ||||
sjj_T05A10.1 | |||||
Matching_cDNA | AY390537 | Inferred_automatically | transcript_builder.pl | ||
RNAi_result | Cenix:141-d2 | ||||
JA:T05A10.1 | |||||
WB_RNAi_result | SA:yk228h6 | ||||
JA:T05A10.1 | |||||
Cenix:141-d2 | |||||
GO_term | GO:0003676 | IEA | Inferred_automatically | ||
GO:0008270 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
Variation | cxP7725 | ||||
snp_T05A10[1] | |||||
tm572 | |||||
wk55 | |||||
Microarray_results | SMD_T05A10.1 | ||||
194009_at | |||||
Aff_T05A10.1 | |||||
Remark | [alt] Alternate isoform defined RT-PCR | ||||
[040206 pad] This gene prediction uses the original gene finder prediction as a templeate where the Transcript data is abscent as the isoform is based on a partial mRNA. | |||||
[040204 pad] Gene prediction entered to represent data contained within Development 130, 6453-6464 (2003) 5'C variant | Paper_evidence | WBPaper00013343 | |||
Associated_feature | WBsf006520 | ||||
Method | curated |