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CDS: T05A10.1f
| T05A10.1f | SMap | S_parent | Sequence | T05A10 | |
|---|---|---|---|---|---|
| Structure | Source_exons (25) | ||||
| DB_info | Database | TREMBL | Q7JM42_CAEEL | ||
| TrEMBL_AC | Q7JM42 | ||||
| NDB | GI_number | 42734256 | |||
| Protein_id | T05A10 | CAF31493 | 1 | ||
| DB_remark | C. elegans SMA-9 protein; contains similarity to Pfam domains PF00096 (Zinc finger, C2H2 type)(7), PF00904 (Involucrin repeat)(3)contains similarity to Interpro domains IPR003604 (Zinc finger, U1-type), IPR007087 (Zinc finger, C2H2-type) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Paper_evidence | WBPaper00013343 | |||
| Visible | Gene | T05A10.1 | |||
| Corresponding_transcript | T05A10.1f | ||||
| Corresponding_protein | WP:CE36400 | ||||
| Corresponding_PCR_product | cenix:141-d2 | ||||
| sjj_T05A10.1 | |||||
| mv_T05A10.1 | |||||
| Corresponding_RNAi_reagent | Cenix:141-d2 | ||||
| sjj_T05A10.1 | |||||
| Matching_cDNA | CB102833 | Inferred_automatically | transcript_builder.pl | ||
| RNAi_result | Cenix:141-d2 | ||||
| JA:T05A10.1 | |||||
| WB_RNAi_result | SA:yk228h6 | ||||
| JA:T05A10.1 | |||||
| Cenix:141-d2 | |||||
| GO_term | GO:0003676 | IEA | Inferred_automatically | ||
| GO:0008270 | IEA | Inferred_automatically | |||
| GO:0005634 | IEA | Inferred_automatically | |||
| Variation (5) | |||||
| Microarray_results | SMD_T05A10.1 | ||||
| 194009_at | |||||
| Aff_T05A10.1 | |||||
| Remark | [alt] Alternate isoform defined by RT-PCR | ||||
| [040206 pad] This gene prediction uses the original gene finder prediction as a templeate where the Transcript data is abscent as the isoform is based on a partial mRNA. | |||||
| [040204 pad] Gene prediction entered to represent data contained within Development 130, 6453-6464 (2003)) 3' Ic variant | Paper_evidence | WBPaper00013343 | |||
| Method | curated |
