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CDS: T07C4.2
| T07C4.2 | SMap | S_parent | Sequence | T07C4 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 296 | |||
| 679 | 754 | |||||
| 810 | 962 | |||||
| 1596 | 2018 | |||||
| DB_info | Database | SwissProt | SwissProt_ID | TBX8_CAEEL | ||
| SwissProt_AC | Q22292 | |||||
| NDB | GI_number | 51011749 | ||||
| NCBI | RefSeq | NM_066886 | ||||
| Protein_id | T07C4 | CAA82578 | 2 | |||
| DB_remark | C. elegans TBX-8 protein; contains similarity to Pfam domain PF00907 (T-box)contains similarity to Interpro domain IPR001699 (Transcription factor, T-box) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | T07C4.2 | ||||
| Corresponding_transcript | T07C4.2 | |||||
| Corresponding_protein | WP:CE36891 | |||||
| Corresponding_PCR_product | cenix:322-b3 | |||||
| sjj_T07C4.2 | ||||||
| TH:322B3 | ||||||
| mv_G_YK5696 | ||||||
| Corresponding_RNAi_reagent | Cenix:322-b3 | |||||
| sjj_T07C4.2 | ||||||
| TH:322B3 | ||||||
| Matching_cDNA (6) | ||||||
| RNAi_result | Cenix:322-b3 | |||||
| JA:T07C4.2 | ||||||
| TH:322B3 | ||||||
| WB_RNAi_result | TH:322B3 | |||||
| JA:T07C4.2 | ||||||
| Cenix:322-b3 | ||||||
| GO_term | GO:0003700 | IEA | Inferred_automatically | |||
| GO:0006355 | IEA | Inferred_automatically | ||||
| GO:0005634 | IEA | Inferred_automatically | ||||
| Variation | ok656 | |||||
| Microarray_results | SMD_T07C4.2 | |||||
| 190477_at | ||||||
| Aff_T07C4.2 | ||||||
| Brief_identification | Brachyury | |||||
| Remark | initial and final exons uncertain; possible frameshift in 2nd exon | |||||
| Genefinder fused to T07C4.3 | ||||||
| [040609 pad] Gene prediction altered to follow EST and mRNA data, removed final exon. | Accession_evidence | NDB | AB121091 | |||
| Associated_feature | WBsf019457 | |||||
| Method | curated |
