CDS: T07H6.3a
T07H6.3a | SMap | S_parent | Sequence | T07H6 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 186 | ||
342 | 1247 | ||||
DB_info | Database | TREMBL | Q22326_CAEEL | ||
TrEMBL_AC | Q22326 | ||||
NDB | GI_number | 1255887 | |||
Protein_id | T07H6 | AAA96223 | 1 | ||
DB_remark | C. elegans COL-166 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Accession_evidence | EMBL | BJ752512 | ||
Visible | Gene | T07H6.3 | |||
Corresponding_transcript | T07H6.3a | ||||
Corresponding_protein | WP:CE04913 | ||||
Corresponding_PCR_product | cenix:133-e5 | ||||
mv_T07H6.3 | |||||
sjj_T07H6.3 | |||||
smd_T07H6.3 | |||||
Corresponding_RNAi_reagent | Cenix:133-e5 | ||||
sjj_T07H6.3 | |||||
Matching_cDNA (78) | |||||
RNAi_result | Cenix:133-e5 | ||||
Simmer:T07H6.3 | |||||
WB_RNAi_result | SA:yk370d11 | ||||
Simmer:T07H6.3 | |||||
MV_SV:mv_C44C10.1 | |||||
MV_SV:mv_T07H6.3 | |||||
MV_SV:mv_T10E10.d | |||||
Cenix:133-e5 | |||||
GO_term (6) | |||||
Microarray_results | SMD_T07H6.3 | ||||
Brief_identification | collagen | ||||
Y2H_target | Y2H011494 | ||||
Remark | this isoform is based on EMBL accession BJ752512 | ||||
Associated_feature | WBsf001068 | ||||
Method | curated |