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CDS: T09A12.4b
| T09A12.4b | SMap | S_parent | Sequence | T09A12 | |
|---|---|---|---|---|---|
| Structure | Source_exons (8) | ||||
| DB_info | Database | TREMBL | Q8MXH0_CAEEL | ||
| TrEMBL_AC | Q8MXH0 | ||||
| NDB | GI_number | 21450530 | |||
| NCBI | RefSeq | NM_171398 | |||
| Protein_id | T09A12 | AAM54167 | 1 | ||
| DB_remark | C. elegans NHR-66 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | BJ800563 | ||
| Visible | Gene | T09A12.4 | |||
| Corresponding_transcript | T09A12.4b | ||||
| Corresponding_protein | WP:CE31062 | ||||
| Corresponding_PCR_product | cenix:39-c5 | ||||
| sjj_T09A12.4 | |||||
| mv_T09A12.4 | |||||
| Corresponding_RNAi_reagent | Cenix:39-c5 | ||||
| sjj_T09A12.4 | |||||
| Matching_cDNA | yk381g2.5 | Inferred_automatically | transcript_builder.pl | ||
| yk1439b07.5 | Inferred_automatically | transcript_builder.pl | |||
| CK579561 | Inferred_automatically | transcript_builder.pl | |||
| Expr_pattern | Expr438 | ||||
| Expr1182 | |||||
| RNAi_result | Cenix:39-c5 | ||||
| JA:T09A12.4 | |||||
| PF:GL1_8F11 | |||||
| WB_RNAi_result | JA:T09A12.4 | ||||
| Cenix:39-c5 | |||||
| PF:GL1_8F11 | |||||
| GO_term (6) | |||||
| Variation | ok940 | ||||
| pkP4038 | |||||
| tm1720 | |||||
| Microarray_results | SMD_T09A12.4 | ||||
| Y2H_target | Y2H008394 | ||||
| Remark | this isoform is based on EMBL accession BJ800563 | ||||
| Method | curated |
