CDS: T10E10.2
T10E10.2 | SMap | S_parent | Sequence | T10E10 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 906 | ||
DB_info | Database | TREMBL (2) | |||
NDB | GI_number | 14625274 | |||
NCBI | RefSeq | NM_076658 | |||
Protein_id | T10E10 | AAA80358 | 2 | ||
DB_remark | C. elegans COL-167 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | T10E10.2 | |||
Corresponding_transcript | T10E10.2.1 | ||||
T10E10.2.2 | |||||
T10E10.2.3 | |||||
Corresponding_protein | WP:CE23969 | ||||
Corresponding_PCR_product | mv_T10E10.d | ||||
smd_T10E10.2 | |||||
smd_T10E10.2:2 | |||||
Matching_cDNA (44) | |||||
WB_RNAi_result | Simmer:T07H6.3 | ||||
MV_SV:mv_C44C10.1 | |||||
MV_SV:mv_T07H6.3 | |||||
MV_SV:mv_T10E10.d | |||||
GO_term (6) | |||||
Microarray_results | SMD_T10E10.2 | ||||
172736_x_at | |||||
Brief_identification | collagen | ||||
Remark | may be a pseudogene because of the frameshift | ||||
Associated_feature | WBsf015293 | ||||
Method | curated |