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CDS: T10E10.6   

T10E10.6SMapS_parentSequenceT10E10
StructureSource_exons1903
DB_info Database TREMBL Q86NE3_CAEEL
TrEMBL_AC Q86NE3
NDB GI_number 28476820
Protein_idT10E10 AAO449071
DB_remarkC. elegans COL-170 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Visible GeneT10E10.6
Corresponding_transcriptT10E10.6
Corresponding_proteinWP:CE23972
Corresponding_PCR_product smd_T10E10.2
smd_T10E10.2:2
Matching_cDNA CK575859 Inferred_automaticallytranscript_builder.pl
CK577274 Inferred_automaticallytranscript_builder.pl
WB_RNAi_result Simmer:T07H6.3
MV_SV:mv_C44C10.1
MV_SV:mv_T07H6.3
MV_SV:mv_T10E10.d
GO_term (6)
Microarray_resultsSMD_T10E10.2
Brief_identificationcollagen
Remarkthis gene was created based on an analysis of collogens by Jim Kramer and Danielle Thierry-Mieg [js 20030212]
Methodcurated