CDS: T11G6.1b
T11G6.1b | SMap | S_parent | Sequence | T11G6 | |
---|---|---|---|---|---|
Structure | Source_exons (5) | ||||
DB_info | Database | SwissProt | SwissProt_ID | SYH_CAEEL | |
SwissProt_AC | P34183 | ||||
NDB | GI_number | 30145709 | |||
Protein_id | T11G6 | CAD89746 | 1 | ||
DB_remark | C. elegans HRS-1 protein; contains similarity to Pfam domains PF00587 (tRNA synthetase class II core domain (G, H, P, S and T)), PF03129 (Anticodon binding domain)contains similarity to Interpro domains IPR002314 (tRNA synthetase, class II (G, H, P and S)), IPR006195 (Aminoacyl-transfer RNA synthetase, class II), IPR004154 (Anticodon-binding), IPR004516 (Histidyl-tRNA synthetase, class IIa) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | BJ803269 | ||
Inferred_automatically | transcript_builder | ||||
Visible | Gene | T11G6.1 | |||
Corresponding_transcript | T11G6.1b | ||||
Corresponding_protein | WP:CE33829 | ||||
Corresponding_PCR_product | cenix:54-e2 | ||||
mv_AAB38116 | |||||
sjj_T11G6.1 | |||||
mv_T11G6.1 | |||||
Corresponding_RNAi_reagent | Cenix:54-e2 | ||||
sjj_T11G6.1 | |||||
Matching_cDNA | yk1471c05.5 | Inferred_automatically | transcript_builder.pl | ||
yk1125b07.5 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:54-e2 | ||||
JA:T11G6.1 | |||||
Simmer:T11G6.1 | |||||
WB_RNAi_result | JA:T11G6.1 | ||||
Simmer:T11G6.1 | |||||
MV_SV:mv_AAB38116 | |||||
Cenix:54-e2 | |||||
GO_term (13) | |||||
Microarray_results | SMD_T11G6.1 | ||||
190675_at | |||||
Aff_T11G6.1 | |||||
Brief_identification | histidyl-tRNA synthetase (mitochondrial) | Curator_confirmed | |||
Remark | [alt] Alternate isoform defined by EST yk1125b07 | ||||
Associated_feature | WBsf003145 | ||||
Method | curated |