CDS: T12C9.1
T12C9.1 | SMap | S_parent | Sequence | T12C9 | |
---|---|---|---|---|---|
Structure | Source_exons (5) | ||||
DB_info | Database | TREMBL | Q95QB3_CAEEL | ||
TrEMBL_AC | Q95QB3 | ||||
NDB | GI_number | 13325004 | |||
Protein_id | T12C9 | AAK18975 | 1 | ||
DB_remark | C. elegans NHR-273 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | T12C9.1 | |||
Corresponding_transcript | T12C9.1 | ||||
Corresponding_protein | WP:CE26822 | ||||
Corresponding_PCR_product | cenix:200-c11 | ||||
Corresponding_RNAi_reagent | Cenix:200-c11 | ||||
Matching_cDNA | yk1652c06.3 | Inferred_automatically | transcript_builder.pl | ||
OSTF30043A07 | Inferred_automatically | transcript_builder.pl | |||
yk1652c06.5 | Inferred_automatically | transcript_builder.pl | |||
OSTR30043A07 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:200-c11 | ||||
WB_RNAi_result | Cenix:200-c11 | ||||
GO_term (6) | |||||
Variation | tm1787 | ||||
Brief_identification | zinc finger DNA-binding protein | ||||
Remark | the last two exons were altered based on the sequence of the EST clone CEESU44R communicated by Ann Sluder-981015-js | ||||
the locus designation nhr-16 was transferred to T12C9.6 after the insertion of missing sequence truncated this gene - 01-05-22 js | |||||
Method | curated |