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CDS: T12C9.5b
| T12C9.5b | SMap | S_parent | Sequence | T12C9 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 31 | ||
| 390 | 757 | ||||
| 1076 | 1260 | ||||
| 1312 | 1684 | ||||
| DB_info | Database | TREMBL | Q7JP54_CAEEL | ||
| TrEMBL_AC | Q7JP54 | ||||
| NDB | GI_number | 39752846 | |||
| Protein_id | T12C9 | AAR30202 | 1 | ||
| DB_remark | C. elegans NHR-109 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | AY204194 | ||
| Visible | Gene | T12C9.5 | |||
| Corresponding_transcript | T12C9.5b | ||||
| Corresponding_protein | WP:CE36324 | ||||
| Corresponding_PCR_product | cenix:207-b1 | ||||
| mv_T12C9.5 | |||||
| sjj_T12C9.5 | |||||
| smd_T12C9.5 | |||||
| Corresponding_RNAi_reagent | Cenix:207-b1 | ||||
| Matching_cDNA | yk805b02.3 | Inferred_automatically | transcript_builder.pl | ||
| AY204194 | Inferred_automatically | transcript_builder.pl | |||
| OSTR30022D08 | Inferred_automatically | transcript_builder.pl | |||
| yk711d10.3 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:207-b1 | ||||
| WB_RNAi_result | Cenix:207-b1 | ||||
| GO_term | GO:0003700 | IEA | Inferred_automatically | ||
| GO:0006355 | IEA | Inferred_automatically | |||
| GO:0005634 | IEA | Inferred_automatically | |||
| GO:0003707 | IEA | Inferred_automatically | |||
| Variation | CE2-132 | ||||
| uCE2-1574 | |||||
| uCE2-1575 | |||||
| Microarray_results (5) | |||||
| Remark | this isoform is based on EMBL accession AY204194 | ||||
| Method | curated |
