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CDS: T13A10.11b
| T13A10.11b | SMap | S_parent | Sequence | T13A10 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 103 | ||
| 149 | 531 | ||||
| 579 | 988 | ||||
| 1034 | 1199 | ||||
| DB_info | Database | SwissProt | SwissProt_ID | METN_CAEEL | |
| SwissProt_AC | Q27522 | ||||
| NDB | GI_number | 22532789 | |||
| Protein_id | T13A10 | AAM97949 | 1 | ||
| DB_remark | C. elegans TAG-32 protein; contains similarity to Pfam domains PF02772 (S-adenosylmethionine synthetase, central domain), PF02773 (S-adenosylmethionine synthetase, C-terminal domain), PF00438 (S-adenosylmethionine synthetase, N-terminal domain)contains similarity to Interpro domain IPR002133 (S-adenosylmethionine synthetase) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | BJ801096 | ||
| Visible | Gene | T13A10.11 | |||
| Corresponding_transcript | T13A10.11b | ||||
| Corresponding_protein | WP:CE31726 | ||||
| Corresponding_PCR_product | cenix:187-e5 | ||||
| mv_T13A10.11 | |||||
| sjj_T13A10.11 | |||||
| smd_T13A10.11 | |||||
| Corresponding_RNAi_reagent | Cenix:187-e5 | ||||
| sjj_T13A10.11 | |||||
| Matching_cDNA | yk841f05.5 | Inferred_automatically | transcript_builder.pl | ||
| yk613b9.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1445c12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk343b11.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:187-e5 | ||||
| JA:T13A10.11 | |||||
| Simmer:T13A10.11:Repeat_a | |||||
| Simmer:T13A10.11:Screen | |||||
| WB_RNAi_result (18) | |||||
| GO_term (8) | |||||
| Variation | gk147 | ||||
| Microarray_results | SMD_T13A10.11 | ||||
| Remark | [20020815 db] EST data indicates 3 confirmed introns in the 5' UTR | ||||
| SL1 trans-splice site; see yk722b8.5 [20030326 po] | |||||
| this isoform is based on EMBL accession BJ801096 | |||||
| Associated_feature | WBsf008938 | ||||
| Method | curated |
