CDS: T14B4.6
T14B4.6 | SMap | S_parent | Sequence | T14B4 | |
---|---|---|---|---|---|
Structure | Source_exons (5) | ||||
DB_info | Database | SwissProt | SwissProt_ID | DPY2_CAEEL | |
SwissProt_AC | P35799 | ||||
NDB | GI_number | 13592463 | |||
NCBI | RefSeq | NM_062966 | |||
Protein_id | T14B4 | AAK31557 | 1 | ||
DB_remark | C. elegans DPY-2 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | T14B4.6 | |||
Corresponding_transcript | T14B4.6 | ||||
Corresponding_protein | WP:CE04953 | ||||
Corresponding_PCR_product (4) | |||||
Corresponding_RNAi_reagent | Cenix:222-c12 | ||||
sjj_T14B4.6 | |||||
Matching_cDNA (73) | |||||
RNAi_result | Cenix:222-c12 | ||||
JA:T14B4.6 | |||||
WB_RNAi_result | JA:T14B4.6 | ||||
MV_SV:mv_T14B4.6 | |||||
Cenix:222-c12 | |||||
GO_term (5) | |||||
Microarray_results | SMD_T14B4.6 | ||||
173355_s_at | |||||
184162_at | |||||
Aff_T14B4.6 | |||||
Remark | the difference between this sequence and the GenBank entry for dpy-2 at 11004 that leads to a frameshift and longer last exon has been check | ||||
the EST yk115b6.3 confirm the single C at position 11004 | |||||
Associated_feature | WBsf015929 | ||||
Method | curated |