CDS: T15D6.6
T15D6.6 | SMap | S_parent | Sequence | T15D6 | |
---|---|---|---|---|---|
Structure | Source_exons (7) | ||||
DB_info | Database | TREMBL | O02316_CAEEL | ||
TrEMBL_AC | O02316 | ||||
NDB | GI_number | 24817546 | |||
NCBI | RefSeq | NM_060736 | |||
Protein_id | T15D6 | CAB05622 | 2 | ||
DB_remark | C. elegans NHR-77 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Predicted | ||||
Visible | Gene | T15D6.6 | |||
Corresponding_transcript | T15D6.6 | ||||
Corresponding_protein | WP:CE32209 | ||||
Corresponding_PCR_product | cenix:212-c6 | ||||
sjj_T15D6.6 | |||||
mv_T15D6.6 | |||||
Corresponding_RNAi_reagent | Cenix:212-c6 | ||||
sjj_T15D6.6 | |||||
Expr_pattern | Expr1175 | ||||
RNAi_result | Cenix:212-c6 | ||||
JA:T15D6.6 | |||||
WB_RNAi_result | JA:E03H4.6 | ||||
JA:T15D6.6 | |||||
Cenix:212-c6 | |||||
GO_term | GO:0003700 | IEA | Inferred_automatically | ||
GO:0006355 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
GO:0003707 | IEA | Inferred_automatically | |||
Variation | tm1384 | ||||
Microarray_results | SMD_T15D6.6 | ||||
193530_at | |||||
Aff_T15D6.6 | |||||
Brief_identification | Zinc finger, C4 type (two domains) | ||||
Remark | [970305 dl] Pfam signature for C4 type zinc finger (PF00105) | ||||
Annotated using Pfam | |||||
[021015 dl] Extended intron 3 to weaker splice donor to lengthen intron from 19 bp to 49 bp | |||||
Method | curated |