CDS: T19E7.2a
T19E7.2a | SMap | S_parent | Sequence | T19E7 | |
---|---|---|---|---|---|
Structure | Source_exons (8) | ||||
DB_info | Database | SwissProt | SwissProt_ID | SKN1_CAEEL | |
SwissProt_AC | P34707 | ||||
NDB | GI_number | 14574234 | |||
NCBI | RefSeq | NM_171345 | |||
Protein_id | T19E7 | AAA83594 | 2 | ||
DB_remark | C. elegans SKN-1 protein; contains similarity to Interpro domain IPR004827 (Basic-leucine zipper (bZIP) transcription factor) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Accession_evidence | EMBL | BJ753790 | ||
Visible | Gene | T19E7.2 | |||
Corresponding_transcript | T19E7.2a | ||||
Corresponding_protein | WP:CE27591 | ||||
Corresponding_PCR_product | cenix:48-g2 | ||||
cenix:176-b11 | |||||
cenix:228-d9 | |||||
mv_T19E7.2 | |||||
sjj_T19E7.2 | |||||
Corresponding_RNAi_reagent | Cenix:48-g2 | ||||
Cenix:176-b11 | |||||
Cenix:228-d9 | |||||
sjj_T19E7.2 | |||||
Matching_cDNA | yk1750f01.5 | Inferred_automatically | transcript_builder.pl | ||
yk895f02.5 | Inferred_automatically | transcript_builder.pl | |||
yk1604e11.5 | Inferred_automatically | transcript_builder.pl | |||
yk889h06.5 | Inferred_automatically | transcript_builder.pl | |||
yk1328f05.5 | Inferred_automatically | transcript_builder.pl | |||
yk1394g09.5 | Inferred_automatically | transcript_builder.pl | |||
yk1437g08.5 | Inferred_automatically | transcript_builder.pl | |||
yk2d12.5 | Inferred_automatically | transcript_builder.pl | |||
yk1113c12.5 | Inferred_automatically | transcript_builder.pl | |||
yk1094d11.5 | Inferred_automatically | transcript_builder.pl | |||
yk1600c03.5 | Inferred_automatically | transcript_builder.pl | |||
yk1451b08.5 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:48-g2 | ||||
JA:T19E7.2 | |||||
Simmer:T19E7.2 | |||||
Cenix:228-d9 | |||||
WB_RNAi_result (13) | |||||
GO_term | GO:0009792 | IMP | Inferred_automatically | ||
GO:0003677 | IEA | Inferred_automatically | |||
GO:0006355 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
Variation | cxP10301 | ||||
Microarray_results | SMD_T19E7.2 | ||||
Remark | exons 1,2,7 and 8 were added based on EST data - 01-05-09 js | ||||
this isoform is based on EMBL accession BJ753790 | |||||
Associated_feature | WBsf002411 | ||||
WBsf019461 | |||||
Method | curated |