CDS: T20B12.6b
T20B12.6b | SMap | S_parent | Sequence | T20B12 | |
---|---|---|---|---|---|
Structure | Source_exons (9) | ||||
DB_info | Database | TREMBL | Q8I7I9_CAEEL | ||
TrEMBL_AC | Q8I7I9 | ||||
NDB | GI_number | 24942967 | |||
Protein_id | T20B12 | AAN65289 | 1 | ||
DB_remark | C. elegans MML-1 protein; contains similarity to Pfam domains PF00010 (Helix-loop-helix DNA-binding domain), PF02984 (Cyclin, C-terminal domain)contains similarity to Interpro domains IPR001092 (Basic helix-loop-helix dimerisation region bHLH), IPR004367 (Cyclin, C-terminal) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Accession_evidence | EMBL | BJ146079 | ||
Visible | Gene | T20B12.6 | |||
Corresponding_transcript | T20B12.6b | ||||
Corresponding_protein | WP:CE32727 | ||||
Corresponding_PCR_product | cenix:305-f4 | ||||
mv_T20B12.6 | |||||
sjj_T20B12.6 | |||||
TH:305F4 | |||||
Corresponding_RNAi_reagent | Cenix:305-f4 | ||||
sjj_T20B12.6 | |||||
TH:305F4 | |||||
Matching_cDNA (19) | |||||
RNAi_result | Cenix:305-f4 | ||||
JA:T20B12.6 | |||||
TH:305F4 | |||||
WB_RNAi_result | TH:305F4 | ||||
JA:T20B12.6 | |||||
MV_SV:mv_T20B12.6 | |||||
Cenix:305-f4 | |||||
GO_term | GO:0000074 | IEA | Inferred_automatically | ||
GO:0005634 | IEA | Inferred_automatically | |||
GO:0030528 | IEA | Inferred_automatically | |||
GO:0045449 | IEA | Inferred_automatically | |||
Variation | ok849 | ||||
Microarray_results | SMD_T20B12.6 | ||||
175004_at | |||||
187597_at | |||||
Aff_T20B12.6 | |||||
Remark | removed last two exons (5435-5733) based on EST data (yk1228a03.3) [as 20021107] | ||||
yk1228a03.3 indicates an intron in the 5' UTR. [tb 20021212] | |||||
this isoform is based on EMBL accession BJ146079 | |||||
Method | curated |