CDS: T20H4.3a
T20H4.3a | SMap | S_parent | Sequence | T20H4 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 87 | ||
198 | 788 | ||||
907 | 1478 | ||||
1525 | 1731 | ||||
1776 | 2064 | ||||
DB_info | Database | TREMBL | Q22620_CAEEL | ||
TrEMBL_AC | Q22620 | ||||
NDB | GI_number | 459009 | |||
Protein_id | T20H4 | AAA50660 | 1 | ||
DB_remark | C. elegans PRS-1 protein; contains similarity to Pfam domains PF00458 (WHEP-TRS domain), PF00587 (tRNA synthetase class II core domain (G, H, P, S and T)), PF03129 (Anticodon binding domain)contains similarity to Interpro domains IPR002314 (tRNA synthetase, class II (G, H, P and S)), IPR000738 (WHEP-TRS), IPR006195 (Aminoacyl-transfer RNA synthetase, class II), IPR004154 (Anticodon-binding), IPR004499 (Prolyl-tRNA synthetase, archael and euk type), IPR002316 (Prolyl-tRNA synthetase, class IIa) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Accession_evidence | EMBL | BJ777028 | ||
Visible | Gene | T20H4.3 | |||
Corresponding_transcript | T20H4.3a.1 | ||||
T20H4.3a.2 | |||||
Corresponding_protein | WP:CE00748 | ||||
Corresponding_PCR_product (5) | |||||
Matching_cDNA (45) | |||||
WB_RNAi_result (7) | |||||
GO_term (13) | |||||
Microarray_results | SMD_T20H4.3 | ||||
191914_at | |||||
Aff_T20H4.3 | |||||
Brief_identification | Prolyl-tRNA synthetase region | ||||
Y2H_bait | Y2H010995 | ||||
Remark | this isoform is based on EMBL accession BJ777028 | ||||
Associated_feature | WBsf000349 | ||||
Method | curated |