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CDS: T21B4.2
| T21B4.2 | SMap | S_parent | Sequence | T21B4 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 61 | ||
| 110 | 207 | ||||
| 516 | 1295 | ||||
| DB_info | Database | TREMBL | O18097_CAEEL | ||
| TrEMBL_AC | O18097 | ||||
| NDB | GI_number | 3879952 | |||
| NCBI | RefSeq | NM_064264 | |||
| Protein_id | T21B4 | CAB03369 | 1 | ||
| DB_remark | C. elegans COL-85 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | T21B4.2 | |||
| Corresponding_transcript | T21B4.2 | ||||
| Corresponding_protein | WP:CE16427 | ||||
| Corresponding_PCR_product | cenix:223-e1 | ||||
| mv_T21B4.2 | |||||
| sjj_T21B4.2 | |||||
| smd_T21B4.2 | |||||
| Corresponding_RNAi_reagent (2) | |||||
| Matching_cDNA | OSTF104B10_1 | Inferred_automatically | transcript_builder.pl | ||
| OSTR104B10_1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:223-e1 | ||||
| JA:T21B4.2 | |||||
| WB_RNAi_result | JA:T21B4.2 | ||||
| MV_SV:mv_T21B4.2 | |||||
| Cenix:223-e1 | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Variation | snp_T21B4[2] | ||||
| uCE2-2113 | |||||
| Microarray_results | SMD_T21B4.2:2 | ||||
| SMD_T21B4.2 | |||||
| 188352_at | |||||
| Aff_T21B4.2 | |||||
| Brief_identification | collagen | ||||
| Method | curated |
