CDS: W04G5.6
W04G5.6 | SMap | S_parent | Sequence | W04G5 | |
---|---|---|---|---|---|
Structure | Source_exons (8) | ||||
DB_info | Database | TREMBL | O18174_CAEEL | ||
TrEMBL_AC | O18174 | ||||
NDB | GI_number | 14530592 | |||
NCBI | RefSeq | NM_060569 | |||
Protein_id | W04G5 | CAB07686 | 3 | ||
DB_remark | C. elegans KIN-23 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine kinase), PF00069 (Protein kinase domain)contains similarity to Interpro domains IPR000719 (Protein kinase), IPR001245 (Tyrosine protein kinase), IPR008266 (Tyrosine protein kinase, active site) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | W04G5.6 | |||
Corresponding_transcript | W04G5.6 | ||||
Corresponding_protein | WP:CE28099 | ||||
Corresponding_PCR_product | cenix:80-c6 | ||||
sjj_W04G5.6 | |||||
mv_W04G5.6 | |||||
smd_W04G5.6 | |||||
Corresponding_RNAi_reagent | Cenix:80-c6 | ||||
sjj_W04G5.6 | |||||
Expr_pattern | Expr602 | ||||
RNAi_result | Cenix:80-c6 | ||||
JA:W04G5.6 | |||||
WB_RNAi_result | JA:W04G5.6 | ||||
Cenix:80-c6 | |||||
GO_term | GO:0004672 | IEA | Inferred_automatically | ||
GO:0005524 | IEA | Inferred_automatically | |||
GO:0006468 | IEA | Inferred_automatically | |||
GO:0004713 | IEA | Inferred_automatically | |||
Variation | gk196 | ||||
ok766 | |||||
Microarray_results | SMD_W04G5.6:2 | ||||
SMD_W04G5.6 | |||||
Brief_identification | tyrosine-protein kinase (KIN15/KIN16 subfamily) (4 domains) | ||||
Remark | [970715 dl] Prosite and Pfam signatures for tyrosine-protein kinase (PS00107, PS00109 & PF00069) | ||||
Annotated using Pfam | |||||
[000127 dl] Prediction modified based on halfwise analysis | |||||
[010606 kj] Changed last exon according to cDNA AF188749 but couldn't find solution for third intron | |||||
Method | curated |