CDS: W09G10.1
W09G10.1 | SMap | S_parent | Sequence | W09G10 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 534 | ||
586 | 669 | ||||
DB_info | Database | TREMBL | O16640_CAEEL | ||
TrEMBL_AC | O16640 | ||||
NDB | GI_number | 14916385 | |||
NCBI | RefSeq | NM_062167 | |||
Protein_id | W09G10 | AAB66109 | 2 | ||
DB_remark | C. elegans COL-72 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies))contains similarity to Interpro domains IPR000637 (HMG-I and HMG-Y, DNA-binding), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | W09G10.1 | |||
Corresponding_transcript | W09G10.1 | ||||
Corresponding_protein | WP:CE28512 | ||||
Corresponding_PCR_product | cenix:188-g4 | ||||
mv_W09G10.1 | |||||
sjj_W09G10.1 | |||||
Corresponding_RNAi_reagent | Cenix:188-g4 | ||||
sjj_W09G10.1 | |||||
Matching_cDNA | yk583e4.5 | Inferred_automatically | transcript_builder.pl | ||
OSTF100E4_1 | Inferred_automatically | transcript_builder.pl | |||
yk583e4.3 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:188-g4 | ||||
JA:W09G10.1 | |||||
WB_RNAi_result | JA:W09G10.1 | ||||
MV_SV:mv_W09G10.1 | |||||
Cenix:188-g4 | |||||
GO_term (2) | |||||
Microarray_results | SMD_W09G10.1 | ||||
188614_at | |||||
188615_s_at | |||||
Aff_W09G10.1 | |||||
Brief_identification | collagen | ||||
Remark | added intron based on EST data 010717 db | ||||
Method | curated |