Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 

CDS: W09G10.1   

W09G10.1SMapS_parentSequenceW09G10
Structure Source_exons 1534
586669
DB_info Database TREMBL (2)
NDB GI_number 14916385
NCBI RefSeq NM_062167
Protein_idW09G10 AAB661092
DB_remarkC. elegans COL-72 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies))contains similarity to Interpro domains IPR000637 (HMG-I and HMG-Y, DNA-binding), IPR008160 (Collagen triple helix repeat)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Visible GeneW09G10.1
Corresponding_transcriptW09G10.1
Corresponding_proteinWP:CE28512
Corresponding_PCR_product cenix:188-g4
mv_W09G10.1
sjj_W09G10.1
Corresponding_RNAi_reagent Cenix:188-g4
sjj_W09G10.1
Matching_cDNA yk583e4.5 Inferred_automaticallytranscript_builder.pl
OSTF100E4_1 Inferred_automaticallytranscript_builder.pl
yk583e4.3 Inferred_automaticallytranscript_builder.pl
RNAi_result Cenix:188-g4
JA:W09G10.1
WB_RNAi_result JA:W09G10.1
MV_SV:mv_W09G10.1
Cenix:188-g4
GO_term GO:0006817 IEA Inferred_automatically
GO:0005737 IEA Inferred_automatically
Microarray_results SMD_W09G10.1
188614_at
188615_s_at
Aff_W09G10.1
Brief_identificationcollagen
Remarkadded intron based on EST data 010717 db
Methodcurated