RNAiDB Tree View

Protein: WP:CE23831

WP:CE23831	Peptide	WP:CE23831	211	-1847780229
	DB_info	Database	SwissProt	SwissProt_ID	RPB5_CAEEL
				SwissProt_AC	Q9N5K2
			WORMPEP	WORMPEP_ID	WP:CE23831
		Molecular_weight	24.3	Inferred_automatically	build_pepace.pl
	Origin	Species	Caenorhabditis elegans
		Wormpep
		History	18	created	H27M09.f
			19	reappeared coded by another gene	H27M09.2
				removed	H27M09.f
		Live
	Visible	Corresponding_CDS	H27M09.2
		Corresponding_Gene	H27M09.2
	Homol	Pep_homol	ENSEMBL:ENSP00000215587	wublastp_human	87.5376	3	210	2	209	Align	3	2
										Target_species	Homo sapiens
			ENSEMBL:ENSP00000247986	wublastp_human	1.5376	30	168	315	436	Align (10)
										Target_species	Homo sapiens
			ENSEMBL:ENSP00000318133	wublastp_human	1.5376	30	168	315	436	Align (10)
										Target_species	Homo sapiens
			FLYBASE:CG11979-PA	wublastp_fly	85.8239	3	210	2	209	Align	3	2
										Target_species	Drosophila melanogaster
			SGD:YBR154C	wublastp_yeast	44.5229	3	209	4	213	Align	3	4
											48	52
											56	61
											127	131
										Target_species	Saccharomyces cerevisiae
			SW:Q80UW8	wublastp_slimSwissProt	87.8539	3	210	2	209	Align	3	2
										Target_species	Mus musculus
			SW:Q6CJ62	wublastp_slimSwissProt	44.9586	3	209	4	213	Align	3	4
											50	49
											73	78
											127	131
										Target_species	Kluyveromyces lactis
			SW:Q757H7	wublastp_slimSwissProt	44.9586	3	209	4	213	Align	3	4
											48	52
											56	61
											127	131
										Target_species	Ashbya gossypii
			SW:Q9P4B9	wublastp_slimSwissProt	44.7212	10	209	11	213	Align	10	11
											50	49
											73	78
											127	131
										Target_species	Kluyveromyces marxianus
			SW:Q6FQA6	wublastp_slimSwissProt	43.7696	10	209	11	213	Align	10	11
											50	49
											73	78
											127	131
										Target_species	Candida glabrata
			SW:Q6BIJ0	wublastp_slimSwissProt	42.9208	1	209	1	212	Align	1	1
											49	52
											56	60
											127	130
										Target_species	Debaryomyces hansenii
			SW:Q09191	wublastp_slimSwissProt	41.3279	1	209	1	208	Align	1	1
											52	50
											65	64
										Target_species	Schizosaccharomyces pombe
			SW:Q6CA26	wublastp_slimSwissProt	38.585	1	209	1	210	Align (6)
										Target_species	Yarrowia lipolytica
			SW:Q5JE31	wublastp_slimSwissProt	14.2147	132	211	1	80	Align	132	1
										Target_species	Pyrococcus kodakaraensis
			SW:Q58443	wublastp_slimSwissProt	13.8861	138	211	1	74	Align	138	1
										Target_species	Methanococcus jannaschii
			TR:Q6DEG5	wublastp_slimTrEmbl	87.5376	3	210	2	209	Align	3	2
										Target_species	Brachydanio rerio
			TR:Q6PA38	wublastp_slimTrEmbl	87.3188	3	210	2	209	Align	3	2
										Target_species	Xenopus laevis
			TR:Q5R587	wublastp_slimTrEmbl	87.2147	3	210	2	209	Align	3	2
										Target_species	Pongo pygmaeus
			TR:Q7PJW8	wublastp_slimTrEmbl	87.1079	3	210	2	209	Align	3	2
										Target_species	Anopheles gambiae str PEST
			TR:Q8R0H0	wublastp_slimTrEmbl	65.1675	3	163	2	162	Align	3	2
										Target_species	Mus musculus
			TR:Q5DDM1	wublastp_slimTrEmbl	64.8539	1	211	1	206	Align (5)
										Target_species	Schistosoma japonicum
			TR:O81098	wublastp_slimTrEmbl	55.8239	1	211	2	205	Align	1	2
											10	9
											56	50
										Target_species	Arabidopsis thaliana
			TR:Q5VQW7	wublastp_slimTrEmbl	53.8239	1	211	5	210	Align	1	5
											56	55
										Target_species	Oryza sativa
			TR:Q7XUF8	wublastp_slimTrEmbl	52.2366	1	211	1	205	Align	1	1
											7	6
											54	47
											67	61
										Target_species	Oryza sativa
			TR:Q5CTZ0	wublastp_slimTrEmbl	49.4949	10	211	16	214	Align	10	16
											49	52
											55	57
											83	86
										Target_species	Cryptosporidium parvum
			BP:CBP03121	wublastp_briggsae	106.921	1	211	1	211	Align	1	1
										Target_species	Caenorhabditis briggsae
				wublastp_worm	106.921	1	211	1	211	Target_species	Caenorhabditis briggsae
			RP:cr01.sctg6.wum.258.1	wublastp_remanei	106.921	1	211	1	211	Align	1	1
										Target_species	Caenorhabditis remanei
		Motif_homol	PFAM:PF01191	pfam	163.3	138	211	1	75
			PFAM:PF03871	pfam	203	2	96	1	118
			INTERPRO:IPR005571
			INTERPRO:IPR000783