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CDS: Y38C1BA.3
| Y38C1BA.3 | SMap | S_parent | Sequence | Y38C1BA | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 79 | ||
| 934 | 1013 | ||||
| 1196 | 1847 | ||||
| 2529 | 2593 | ||||
| DB_info | Database | TREMBL | Q9N527_CAEEL | ||
| TrEMBL_AC | Q9N527 | ||||
| NDB | GI_number | 7331814 | |||
| NCBI | RefSeq | NM_067737 | |||
| Protein_id | Y38C1BA | AAF60502 | 1 | ||
| DB_remark | C. elegans COL-109 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | Y38C1BA.3 | |||
| Corresponding_transcript | Y38C1BA.3 | ||||
| Corresponding_protein | WP:CE21569 | ||||
| Corresponding_PCR_product | cenix:232-d8 | ||||
| mv_Y38C1BA.3 | |||||
| sjj_Y38C1BA.a | |||||
| sjj_Y38C1BA.g | |||||
| Corresponding_RNAi_reagent | Cenix:232-d8 | ||||
| sjj_Y38C1BA.a | |||||
| sjj_Y38C1BA.g | |||||
| Matching_cDNA | OSTR077G9_1 | Inferred_automatically | transcript_builder.pl | ||
| yk366e4.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1549f10.3 | Inferred_automatically | transcript_builder.pl | |||
| OSTF077G9_1 | Inferred_automatically | transcript_builder.pl | |||
| yk277f4.5 | Inferred_automatically | transcript_builder.pl | |||
| yk93a3.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1549f10.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:232-d8 | ||||
| JA:Y38C1BA.a | |||||
| JA:Y38C1BA.g | |||||
| WB_RNAi_result (5) | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results (7) | |||||
| Brief_identification | collagen | ||||
| Associated_feature | WBsf015563 | ||||
| Method | curated |
