CDS: Y38C1BA.3
Y38C1BA.3 | SMap | S_parent | Sequence | Y38C1BA | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 79 | ||
934 | 1013 | ||||
1196 | 1847 | ||||
2529 | 2593 | ||||
DB_info | Database | TREMBL | Q9N527_CAEEL | ||
TrEMBL_AC | Q9N527 | ||||
NDB | GI_number | 7331814 | |||
NCBI | RefSeq | NM_067737 | |||
Protein_id | Y38C1BA | AAF60502 | 1 | ||
DB_remark | C. elegans COL-109 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(3)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | Y38C1BA.3 | |||
Corresponding_transcript | Y38C1BA.3 | ||||
Corresponding_protein | WP:CE21569 | ||||
Corresponding_PCR_product | cenix:232-d8 | ||||
mv_Y38C1BA.3 | |||||
sjj_Y38C1BA.a | |||||
sjj_Y38C1BA.g | |||||
Corresponding_RNAi_reagent | Cenix:232-d8 | ||||
sjj_Y38C1BA.a | |||||
sjj_Y38C1BA.g | |||||
Matching_cDNA (7) | |||||
RNAi_result (3) | |||||
WB_RNAi_result (5) | |||||
GO_term | GO:0042302 | IEA | Inferred_automatically | ||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Microarray_results (7) | |||||
Brief_identification | collagen | ||||
Associated_feature | WBsf015563 | ||||
Method | curated |