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CDS: Y38F2AL.3b
| Y38F2AL.3b | SMap | S_parent | Sequence | Y38F2AL | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 138 | ||
| 536 | 603 | ||||
| 659 | 744 | ||||
| 1628 | 1737 | ||||
| DB_info | Database | TREMBL | Q869J4_CAEEL | ||
| TrEMBL_AC | Q869J4 | ||||
| NDB | GI_number | 66773724 | |||
| Protein_id | Y38F2AL | AAO91689 | 2 | ||
| DB_remark | C. elegans VHA-11 protein; contains similarity to Pfam domain PF03223 (V-ATPase subunit C)contains similarity to Interpro domain IPR004907 (V-ATPase subunit C) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | BJ111623 | ||
| Visible | Gene | Y38F2AL.3 | |||
| Corresponding_transcript | Y38F2AL.3b | ||||
| Corresponding_protein | WP:CE38743 | ||||
| Corresponding_PCR_product | mv_BAA75067 | ||||
| sjj_Y38F2A_5743.f | |||||
| sjj_Y38F2A_5743.i | |||||
| Corresponding_RNAi_reagent | sjj_Y38F2A_5743.f | ||||
| sjj_Y38F2A_5743.i | |||||
| Matching_cDNA (5) | |||||
| RNAi_result | Simmer:Y38F2A_5743.i | ||||
| JA:Y38F2A_5743.f | |||||
| Simmer:Y38F2A_5743.f | |||||
| WB_RNAi_result | JA:Y38F2A_5743.f | ||||
| Simmer:Y38F2A_5743.f | |||||
| Simmer:Y38F2A_5743.i | |||||
| MV_SV:mv_BAA75067 | |||||
| GO_term (11) | |||||
| Microarray_results (6) | |||||
| Remark | yk1145e06.5 suggests that there are 2 confirmed intron is the 3' UTR. [tb 20030326] | ||||
| this isoform is based on EMBL accession BJ111623 | |||||
| Associated_feature | WBsf000009 | ||||
| Method | curated |
