Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 

CDS: Y38F2AR.4   

Y38F2AR.4SMapS_parentSequenceY38F2AR
Structure Source_exons (6)
DB_info Database TREMBL Q27397_CAEEL
TrEMBL_AC Q27397
NDB GI_number 52839821
Protein_idY38F2AR AAU878141
DB_remarkcontains similarity to Pfam domains PF04236 (Tc5 transposase C-terminal domain), PF03184 (DDE superfamily endonuclease), PF03221 (Tc5 transposase)contains similarity to Interpro domains IPR006600 (Centromere protein B, DNA-binding region), IPR007350 (Tc5 transposase, C-terminal), IPR004906 (Tc5 transposase), IPR004875 (CENP-B protein)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPredicted
Visible GeneY38F2AR.4
Corresponding_transcriptY38F2AR.4
Corresponding_proteinWP:CE37564
Corresponding_PCR_product (5)
Corresponding_RNAi_reagent (5)
RNAi_result (5)
WB_RNAi_result JA:M116.2
JA:M116.3
JA:T13C2.1
JA:Y54C5B.1
GO_term GO:0003676 IEA Inferred_automatically
GO:0005634 IEA Inferred_automatically
Microarray_resultsSMD_Y38F2A_9208.A
Brief_identificationtransposase
Remarkmerged four 3' exon into Y38F2AR.5 based on EST data(yk725h5.3)[20040924 po]
Methodcurated