CDS: Y38F2AR.4
Y38F2AR.4 | SMap | S_parent | Sequence | Y38F2AR | |
---|---|---|---|---|---|
Structure | Source_exons (6) | ||||
DB_info | Database | TREMBL | Q27397_CAEEL | ||
TrEMBL_AC | Q27397 | ||||
NDB | GI_number | 52839821 | |||
Protein_id | Y38F2AR | AAU87814 | 1 | ||
DB_remark | contains similarity to Pfam domains PF04236 (Tc5 transposase C-terminal domain), PF03184 (DDE superfamily endonuclease), PF03221 (Tc5 transposase)contains similarity to Interpro domains IPR006600 (Centromere protein B, DNA-binding region), IPR007350 (Tc5 transposase, C-terminal), IPR004906 (Tc5 transposase), IPR004875 (CENP-B protein) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Predicted | ||||
Visible | Gene | Y38F2AR.4 | |||
Corresponding_transcript | Y38F2AR.4 | ||||
Corresponding_protein | WP:CE37564 | ||||
Corresponding_PCR_product (5) | |||||
Corresponding_RNAi_reagent (5) | |||||
RNAi_result (5) | |||||
WB_RNAi_result | JA:M116.2 | ||||
JA:M116.3 | |||||
JA:T13C2.1 | |||||
JA:Y54C5B.1 | |||||
GO_term | GO:0003676 | IEA | Inferred_automatically | ||
GO:0005634 | IEA | Inferred_automatically | |||
Microarray_results | SMD_Y38F2A_9208.A | ||||
Brief_identification | transposase | ||||
Remark | merged four 3' exon into Y38F2AR.5 based on EST data(yk725h5.3)[20040924 po] | ||||
Method | curated |