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Gene: Y39A3CL.5   

Y39A3CL.5SMapS_parentSequenceY39A3CL
ChromosomeIII
Identity (5)
Gene_info Gene_classclp
GO_term GO:0004197 IEA Inferred_automatically
GO:0006508 IEA Inferred_automatically
GO:0004198 IEA Inferred_automatically
GO:0005622 IEA Inferred_automatically
Structured_description Provisional_descriptionclp-4 encodes a large calpain subunit that is homologous to Drosophila CalpainB and the mammalian muscle-specific Calpain 3 proteins (OMIM:114240, mutations are associated with limb-girdle muscular dystrophy); by homology, CLP-4 is predicted to function as a nonlysosomal, calcium-dependent, cysteine protease that is involved in intracellular proteolysis and peptidolysis; however, as loss of clp-4 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of CLP-4 in C. elegans development and/or behavior is not yet known. Paper_evidence WBPaper00004403
WBPaper00005654
Person_evidenceWBPerson1843
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Concise_descriptionclp-4 encodes a large calpain subunit that is homologous to Drosophila CalpainB and the mammalian muscle-specific Calpain 3 proteins (OMIM:114240, mutations are associated with limb-girdle muscular dystrophy); by homology, CLP-4 is predicted to function as a nonlysosomal, calcium-dependent, cysteine protease that is involved in intracellular proteolysis and peptidolysis; however, as loss of clp-4 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of CLP-4 in C. elegans development and/or behavior is not yet known.
Molecular_info Corresponding_CDS Y39A3CL.5a
Y39A3CL.5b
Corresponding_protein WP:CE33219
WP:CE33220
Corresponding_PCR_productsjj_Y39A3C_85.a
Corresponding_RNAi_reagent Cenix:337-b2
sjj_Y39A3C_85.a
TH:337B2
mv_Y39A3CL.5
Experimental_info RNAi_result Cenix:337-b2
JA:Y39A3C_85.a
TH:337B2
WB_RNAi_result TH:337B2
JA:Y39A3C_85.a
MV_SV:mv_Y39A3CL.5
Cenix:337-b2
Reference WBPaper00005513
WBPaper00025192
RemarkSequence connection from [Kuwabara PE]
MethodGene