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CDS: Y39B6A.47   

Y39B6A.47SMapS_parentSequenceY39B6A
Structure Source_exons (15)
DB_info Database TREMBL Q9NEV6_CAEEL
TrEMBL_AC Q9NEV6
NDB GI_number 50470812
Protein_idY39B6A CAC510602
DB_remarkC. elegans NHR-145 protein; contains similarity to Pfam domain PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Visible GeneY39B6A.47
Corresponding_transcriptY39B6A.47
Corresponding_proteinWP:CE36621
Corresponding_PCR_product (7)
Corresponding_RNAi_reagent Cenix:241-d4
sjj_T23H2.1
TH:248-e10
RNAi_result JA:T23H2.1
PF:GL1_2C10
TH:248-e10
Cenix:241-d4
WB_RNAi_result (5)
GO_term (7)
Microarray_results SMD_T23H2.1
SMD_Y39B6B.C
183498_s_at
Aff_Y39B6.C
Remark [011031 dl] Weak prediction. ESTs at 3' end are jumbled.
[040421 dl] Modified prediction based on transcript evidence. Altered splice donor from exon 10. Have to introduce a weak acceptor to maintain frame into exon 11. Maybe a frame-shift in this region
Methodcurated