CDS: Y39B6A.47
Y39B6A.47 | SMap | S_parent | Sequence | Y39B6A | |
---|---|---|---|---|---|
Structure | Source_exons (15) | ||||
DB_info | Database | TREMBL | Q9NEV6_CAEEL | ||
TrEMBL_AC | Q9NEV6 | ||||
NDB | GI_number | 50470812 | |||
Protein_id | Y39B6A | CAC51060 | 2 | ||
DB_remark | C. elegans NHR-145 protein; contains similarity to Pfam domain PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000324 (Vitamin D receptor), IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | Y39B6A.47 | |||
Corresponding_transcript | Y39B6A.47 | ||||
Corresponding_protein | WP:CE36621 | ||||
Corresponding_PCR_product (7) | |||||
Corresponding_RNAi_reagent | Cenix:241-d4 | ||||
sjj_T23H2.1 | |||||
TH:248-e10 | |||||
RNAi_result | JA:T23H2.1 | ||||
PF:GL1_2C10 | |||||
TH:248-e10 | |||||
Cenix:241-d4 | |||||
WB_RNAi_result (5) | |||||
GO_term (7) | |||||
Microarray_results | SMD_T23H2.1 | ||||
SMD_Y39B6B.C | |||||
183498_s_at | |||||
Aff_Y39B6.C | |||||
Remark | [011031 dl] Weak prediction. ESTs at 3' end are jumbled. | ||||
[040421 dl] Modified prediction based on transcript evidence. Altered splice donor from exon 10. Have to introduce a weak acceptor to maintain frame into exon 11. Maybe a frame-shift in this region | |||||
Method | curated |