CDS: Y41C4A.4c
Y41C4A.4c | SMap | S_parent | Sequence | Y41C4A | |
---|---|---|---|---|---|
Structure | Source_exons (7) | ||||
DB_info | Database | TREMBL | Q8I4D8_CAEEL | ||
TrEMBL_AC | Q8I4D8 | ||||
NDB | GI_number | 24817592 | |||
Protein_id | Y41C4A | CAD45607 | 2 | ||
DB_remark | C. elegans CRH-1 protein; contains similarity to Pfam domains PF07716 (Basic region leucine zipper), PF02173 (pKID domain), PF00170 (bZIP transcription factor)contains similarity to Interpro domains IPR003102 (Coactivator CBP, pKID), IPR011616 (bZIP transcription factor, bZIP_1) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | CB405822 | ||
Inferred_automatically | transcript_builder | ||||
Visible | Gene | Y41C4A.4 | |||
Corresponding_transcript | Y41C4A.4c | ||||
Corresponding_protein | WP:CE32251 | ||||
Corresponding_PCR_product (5) | |||||
Corresponding_RNAi_reagent | Cenix:326-g9 | ||||
TH:326G9 | |||||
Matching_cDNA (6) | |||||
RNAi_result | Cenix:326-g9 | ||||
TH:326G9 | |||||
WB_RNAi_result | TH:326G9 | ||||
MV_SV:mv_Y41C4A.4b | |||||
Cenix:326-g9 | |||||
GO_term | GO:0003677 | IEA | Inferred_automatically | ||
GO:0006355 | IEA | Inferred_automatically | |||
GO:0005634 | IEA | Inferred_automatically | |||
GO:0005515 | IEA | Inferred_automatically | |||
Variation (12) | |||||
Microarray_results | SMD_Y41C4A.4 | ||||
189423_s_at | |||||
Aff_Y41C4A.4 | |||||
Remark | [020828 ar2] Isoform with different 5' exon based on EST yk573e4.5 | ||||
[021029 ar2] expanded 3rd last intron at both 3' and 5' ends to match mRNAs | |||||
Associated_feature | WBsf019707 | ||||
Method | curated |